Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metal-dependent hydrolase | VSVS12_RS07105 | Not Available | Negative | 1538639 - 1539640 | 37942.9 |
| hypothetical protein | VSVS12_RS07110 | Not Available | Positive | 1539953 - 1540291 | 12789.1 |
| patatin-like phospholipase family protein | VSVS12_RS07115 | P9WIY8 | Positive | 1540331 - 1541203 | 31451.9 |
| hypothetical protein | VSVS12_RS07120 | Not Available | Positive | 1541238 - 1541594 | 13487.2 |
| duf3360 domain-containing protein | VSVS12_RS07125 | Not Available | Negative | 1541767 - 1543275 | 54662.9 |
| glycoside hydrolase family 2 protein | VSVS12_RS07130 | Q29444 | Positive | 1544036 - 1546444 | 92494.1 |
| lysozyme inhibitor lpri family protein | VSVS12_RS07135 | Not Available | Negative | 1546591 - 1547472 | 33378.9 |
| hypothetical protein | VSVS12_RS07140 | Not Available | Negative | 1547557 - 1548432 | 32581.7 |
| leucine-rich repeat domain-containing protein | VSVS12_RS07145 | Not Available | Negative | 1548487 - 1550220 | 64122.6 |
| ribonuclease h family protein | VSVS12_RS07150 | O70338 | Positive | 1550533 - 1551315 | 28737.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



