Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-fuculose-phosphate aldolase | VSVS12_RS16260 | P0DTQ0 | Positive | 282035 - 282688 | 23913.5 |
| na+/h+ antiporter nhac family protein | VSVS12_RS16265 | Not Available | Positive | 282696 - 284009 | 45690.6 |
| s-methyl-5-thioribose-1-phosphate isomerase | VSVS12_RS16270 | A4ILL1 | Positive | 284019 - 285071 | 38996.9 |
| s-methyl-5-thioribose kinase | VSVS12_RS16275 | P0DTQ2 | Positive | 285078 - 286280 | 46044.0 |
| na+/h+ antiporter nhac family protein | VSVS12_RS16280 | Not Available | Positive | 286454 - 287800 | 46575.9 |
| is4 family transposase | VSVS12_RS16285 | Not Available | Positive | 288084 - 289292 | 45975.1 |
| n-acetyltransferase | VSVS12_RS16290 | Not Available | Positive | 289609 - 290088 | 18171.6 |
| duf5062 family protein | VSVS12_RS16295 | Not Available | Positive | 290158 - 290418 | 9672.06 |
| hlyd family efflux transporter periplasmic adaptor subunit | VSVS12_RS23070 | Not Available | Positive | 290646 - 290774 | 4911.16 |
| helix-turn-helix transcriptional regulator | VSVS12_RS16300 | Not Available | Positive | 290883 - 291179 | 10522.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



