Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | VSVS12_RS16210 | P39647 | Negative | 271402 - 272298 | 33668.8 |
| bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | VSVS12_RS16215 | P56904 | Positive | 272802 - 273656 | 29769.5 |
| phosphatase pap2 family protein | VSVS12_RS16220 | Not Available | Positive | 273861 - 274616 | 28181.0 |
| permease | VSVS12_RS16225 | Not Available | Negative | 274675 - 275748 | 38213.4 |
| hypothetical protein | VSVS12_RS16230 | Not Available | Negative | 276172 - 276663 | 18624.9 |
| is4 family transposase | VSVS12_RS16235 | Not Available | Positive | 276780 - 277988 | 45975.1 |
| deor/glpr family dna-binding transcription regulator | VSVS12_RS16240 | O05261 | Positive | 278734 - 279486 | 28159.9 |
| iron-containing alcohol dehydrogenase | VSVS12_RS16245 | Q04944 | Positive | 279495 - 279836 | 12258.8 |
| is4 family transposase | VSVS12_RS16250 | Not Available | Positive | 279940 - 281148 | 45975.1 |
| iron-containing alcohol dehydrogenase | VSVS12_RS16255 | Not Available | Positive | 281145 - 281996 | 31376.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



