Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa thioesterase ii | VSVS12_RS06400 | P0AGG3 | Negative | 1360378 - 1361238 | 32288.5 |
| ybay family lipoprotein | VSVS12_RS06405 | Not Available | Positive | 1361464 - 1361895 | 15765.0 |
| dna base-flipping protein | VSVS12_RS06410 | A6B4U8 | Negative | 1361937 - 1362239 | 11178.6 |
| hypothetical protein | VSVS12_RS06415 | Not Available | Positive | 1362365 - 1363105 | 27536.7 |
| ggdef domain-containing protein | VSVS12_RS06420 | P76147 | Positive | 1363335 - 1365302 | 74860.6 |
| Ncrna_class:srp_rna | Not Available | Not Available | Positive | 1365459 - 1365555 | Not Available |
| leucine-rich repeat domain-containing protein | VSVS12_RS06430 | Not Available | Positive | 1365783 - 1366838 | 39422.5 |
| ssle/acfd family lipoprotein zinc metalloprotease | VSVS12_RS06435 | P0CK95 | Negative | 1366950 - 1371377 | 163293.0 |
| response regulator | VSVS12_RS06440 | Not Available | Negative | 1371805 - 1373421 | 62155.7 |
| eal domain-containing protein | VSVS12_RS06445 | O34311 | Negative | 1373428 - 1375167 | 65420.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



