Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-acetylglucosamine-specific pts transporter subunit iibc | VSVS12_RS06355 | P09323 | Negative | 1350658 - 1352106 | 51334.7 |
| lysr substrate-binding domain-containing protein | VSVS12_RS06360 | P0A9F8 | Positive | 1352315 - 1353193 | 33906.7 |
| hypothetical protein | VSVS12_RS23175 | Not Available | Positive | 1353284 - 1353457 | 6356.0 |
| yeih family protein | VSVS12_RS06365 | Q87R62 | Negative | 1353479 - 1354402 | 32490.5 |
| mfs transporter | VSVS12_RS06370 | C6DE42 | Negative | 1354558 - 1356432 | 68999.5 |
| tetr/acrr family transcriptional regulator | VSVS12_RS06375 | Not Available | Negative | 1356449 - 1357039 | 22595.0 |
| tim44 domain-containing protein | VSVS12_RS06380 | Not Available | Positive | 1357248 - 1358126 | 31912.0 |
| duf1244 domain-containing protein | VSVS12_RS06385 | Not Available | Positive | 1358241 - 1358561 | 12446.6 |
| plp-dependent cysteine synthase family protein | VSVS12_RS06390 | A5U908 | Negative | 1358694 - 1359761 | 39593.7 |
| lrp/asnc family transcriptional regulator | VSVS12_RS06395 | P0ACJ7 | Positive | 1359888 - 1360346 | 17531.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



