Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pts n-acetylgalactosamine transporter subunit iid | VSVS12_RS06255 | P42911 | Negative | 1330166 - 1331050 | 31762.5 |
| pts n-acetylgalactosamine transporter subunit iic | VSVS12_RS06260 | P42905 | Negative | 1331040 - 1331822 | 27192.1 |
| pts n-acetylgalactosamine transporter subunit iib | VSVS12_RS06265 | P42904 | Negative | 1331840 - 1332313 | 17322.1 |
| sis domain-containing protein | VSVS12_RS06270 | A0KYQ7 | Negative | 1332336 - 1333493 | 42579.6 |
| d-tagatose-bisphosphate aldolase, class ii, non-catalytic subunit | VSVS12_RS06275 | A8AQ21 | Negative | 1333493 - 1334800 | 48507.3 |
| transcriptional repressor agar | VSVS12_RS06280 | Not Available | Negative | 1334809 - 1335585 | 28346.0 |
| cold-shock protein | VSVS12_RS06285 | Q9S170 | Positive | 1336383 - 1336595 | 7583.83 |
| hypothetical protein | VSVS12_RS06290 | Not Available | Positive | 1337095 - 1337304 | 8090.41 |
| transcriptional repressor agar | VSVS12_RS06295 | P0ACK4 | Negative | 1337361 - 1338134 | 28587.0 |
| rhombosortase | VSVS12_RS06300 | Not Available | Negative | 1338234 - 1338761 | 19180.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



