Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta fold hydrolase | VSVS12_RS06060 | A2BGU9 | Positive | 1283159 - 1284004 | 31233.4 |
| long-chain-fatty-acid--coa ligase fadd | VSVS12_RS06065 | Q8ZES9 | Positive | 1284134 - 1285852 | 63472.1 |
| ribonuclease d | VSVS12_RS06070 | P09155 | Positive | 1285923 - 1287041 | 42331.2 |
| hypothetical protein | VSVS12_RS06075 | Not Available | Positive | 1287288 - 1289990 | 104447.0 |
| phospholipase d family protein | VSVS12_RS06080 | P75919 | Negative | 1290062 - 1291660 | 59890.9 |
| sulp family inorganic anion transporter | VSVS12_RS06085 | P55189 | Negative | 1291912 - 1293471 | 55108.6 |
| ribonuclease e | VSVS12_RS06090 | P44443 | Negative | 1293767 - 1296901 | 116590.0 |
| 23s rrna pseudouridine(955/2504/2580) synthase rluc | VSVS12_RS06095 | Q87N15 | Positive | 1297459 - 1298403 | 35785.6 |
| nucleoside triphosphate pyrophosphatase | VSVS12_RS06100 | Q8D8G2 | Negative | 1298564 - 1299160 | 21873.2 |
| 23s rrna accumulation protein yced | VSVS12_RS06105 | P0AB30 | Positive | 1299309 - 1299836 | 19876.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



