Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| asparaginase | VSVS12_RS06010 | P0A963 | Negative | 1271854 - 1272870 | 37089.5 |
| signal peptide peptidase sppa | VSVS12_RS06015 | P08395 | Negative | 1273016 - 1274866 | 67158.9 |
| nadph-dependent 2,4-dienoyl-coa reductase | VSVS12_RS06020 | P42593 | Positive | 1275204 - 1277207 | 73447.3 |
| hypothetical protein | VSVS12_RS06025 | Not Available | Negative | 1277279 - 1277860 | 21572.9 |
| formyltetrahydrofolate deformylase | VSVS12_RS06030 | P0A440 | Negative | 1278067 - 1278900 | 31284.6 |
| hypothetical protein | VSVS12_RS06035 | Not Available | Positive | 1279101 - 1279301 | 7627.02 |
| atp-dependent dna helicase | VSVS12_RS06040 | P76257 | Positive | 1279555 - 1281486 | 71429.0 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex dimerization subunit type 1 tsab | VSVS12_RS06045 | Q87RD1 | Positive | 1281495 - 1282196 | 24942.7 |
| hypothetical protein | VSVS12_RS06050 | Not Available | Positive | 1282238 - 1282540 | 11141.4 |
| slp family lipoprotein | VSVS12_RS06055 | P43991 | Positive | 1282601 - 1283158 | 20482.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



