Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | VSVS12_RS05960 | Q9ZDG1 | Positive | 1262228 - 1263163 | 32101.9 |
| uracil-dna glycosylase family protein | VSVS12_RS05965 | Not Available | Positive | 1263160 - 1263953 | 28905.3 |
| trna dihydrouridine(16) synthase dusc | VSVS12_RS05970 | Q87N01 | Negative | 1264079 - 1265029 | 35577.7 |
| type ii secretion system protein | VSVS12_RS05975 | Not Available | Negative | 1265120 - 1265689 | 20677.2 |
| yeca family protein | VSVS12_RS05980 | Not Available | Positive | 1265893 - 1266507 | 22537.8 |
| outer membrane lipoprotein chaperone lola | VSVS12_RS05985 | Q87QP3 | Positive | 1266635 - 1267231 | 22543.3 |
| replication-associated recombination protein a | VSVS12_RS05990 | P0AAZ6 | Positive | 1267235 - 1268584 | 49729.9 |
| serine--trna ligase | VSVS12_RS05995 | Q87QP1 | Positive | 1268676 - 1269983 | 48919.4 |
| sugar o-acetyltransferase | VSVS12_RS06000 | Q09707 | Positive | 1270205 - 1270759 | 20098.8 |
| dmt family transporter | VSVS12_RS06005 | Not Available | Positive | 1270911 - 1271798 | 32995.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



