Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pts n-acetylgalactosamine transporter subunit iic | VSVS12_RS05715 | P42910 | Positive | 1209588 - 1210358 | 27369.2 |
| pts system mannose/fructose/sorbose family transporter subunit iid | VSVS12_RS05720 | Not Available | Positive | 1210345 - 1211232 | 32008.4 |
| pts galactosamine/n-acetylgalactosamine transporter subunit iia | VSVS12_RS05725 | Not Available | Positive | 1211245 - 1211685 | 15763.8 |
| glycoside hydrolase family 105 protein | VSVS12_RS05730 | L7P9J4 | Positive | 1211861 - 1212901 | 40066.4 |
| rpib/laca/lacb family sugar-phosphate isomerase | VSVS12_RS05735 | Not Available | Positive | 1213046 - 1213687 | 22931.5 |
| duf2264 domain-containing protein | VSVS12_RS05740 | Not Available | Positive | 1213790 - 1215277 | 56750.1 |
| dna-binding transcriptional regulator kdgr | VSVS12_RS05745 | P76268 | Negative | 1215353 - 1216135 | 29638.4 |
| 2-dehydro-3-deoxy-d-gluconate 5-dehydrogenase kdud | VSVS12_RS05750 | P37769 | Positive | 1216416 - 1217177 | 27194.7 |
| ygjv family protein | VSVS12_RS05755 | P42603 | Positive | 1217225 - 1217758 | 19306.3 |
| sugar kinase | VSVS12_RS05760 | P45416 | Positive | 1217868 - 1218797 | 34199.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



