Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pts lactose/cellobiose transporter subunit iia | VSVS12_RS05660 | Not Available | Negative | 1198571 - 1198927 | 13618.5 |
| is4 family transposase | VSVS12_RS05665 | Not Available | Positive | 1199258 - 1200466 | 45975.1 |
| pts sugar transporter subunit iib | VSVS12_RS05670 | Not Available | Positive | 1200495 - 1200791 | 10870.3 |
| pts sugar transporter subunit iic | VSVS12_RS05675 | Not Available | Positive | 1200863 - 1202206 | 50133.3 |
| xaa-pro peptidase family protein | VSVS12_RS05680 | P54518 | Positive | 1202321 - 1203391 | 38941.5 |
| m42 family metallopeptidase | VSVS12_RS05685 | P77585 | Positive | 1203438 - 1204490 | 37516.0 |
| helix-turn-helix domain-containing protein | VSVS12_RS05690 | Not Available | Negative | 1204438 - 1206201 | 67659.2 |
| is4 family transposase | VSVS12_RS05700 | Not Available | Negative | 1207012 - 1208220 | 45975.1 |
| deor/glpr family dna-binding transcription regulator | VSVS12_RS05705 | P77721 | Positive | 1208348 - 1209073 | 27335.5 |
| pts sugar transporter subunit iib | VSVS12_RS05710 | Not Available | Positive | 1209088 - 1209576 | 18178.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



