Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| wyl domain-containing protein | VSVS12_RS05620 | Not Available | Positive | 1188507 - 1189466 | 37387.6 |
| uracil-dna glycosylase family protein | VSVS12_RS22525 | Not Available | Positive | 1189779 - 1189964 | 7055.46 |
| hd domain-containing phosphohydrolase | VSVS12_RS05625 | Not Available | Negative | 1189992 - 1191254 | 47046.2 |
| vc0807 family protein | VSVS12_RS05630 | Not Available | Negative | 1191647 - 1192342 | 25822.1 |
| duf2256 domain-containing protein | VSVS12_RS22530 | Not Available | Positive | 1192712 - 1192873 | 6446.89 |
| sdr family oxidoreductase | VSVS12_RS05635 | Not Available | Negative | 1192925 - 1193632 | 26082.6 |
| cryptochrome/photolyase family protein | VSVS12_RS05640 | A9CH39 | Negative | 1193632 - 1195227 | 61671.6 |
| dash family cryptochrome | VSVS12_RS05645 | Q9KR33 | Negative | 1195227 - 1196567 | 51582.3 |
| hypothetical protein | VSVS12_RS05650 | Not Available | Positive | 1196742 - 1197137 | 14592.9 |
| maly/patb family protein | VSVS12_RS05655 | P23256 | Negative | 1197277 - 1198473 | 44954.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



