Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lytic transglycosylase domain-containing protein | VSVS12_RS05570 | P41052 | Positive | 1179212 - 1180186 | 36810.6 |
| lysr family transcriptional regulator | VSVS12_RS05575 | Not Available | Positive | 1180251 - 1181204 | 36299.4 |
| nupc/nupg family nucleoside cnt transporter | VSVS12_RS05580 | P44742 | Positive | 1181421 - 1182620 | 41593.1 |
| bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase fold | VSVS12_RS05585 | A7MT09 | Negative | 1183472 - 1184332 | 30896.5 |
| Trna-arg | Not Available | Not Available | Positive | 1184535 - 1184611 | Not Available |
| hypothetical protein | VSVS12_RS05595 | Not Available | Negative | 1184785 - 1185330 | 20502.4 |
| duf6765 family protein | VSVS12_RS05600 | Not Available | Negative | 1185348 - 1186412 | 40821.6 |
| hypothetical protein | VSVS12_RS05605 | Not Available | Negative | 1186422 - 1186691 | 9960.87 |
| hypothetical protein | VSVS12_RS05610 | Not Available | Negative | 1186688 - 1187353 | 25325.4 |
| pd-(d/e)xk nuclease superfamily protein | VSVS12_RS05615 | Not Available | Negative | 1187424 - 1187846 | 15788.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



