Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna topoisomerase iii | VSVS12_RS05375 | Q9KQF5 | Positive | 1135531 - 1137474 | 72417.1 |
| hypothetical protein | VSVS12_RS05380 | Not Available | Negative | 1137527 - 1137730 | 7687.03 |
| histone deacetylase | VSVS12_RS05385 | P28606 | Positive | 1138125 - 1139042 | 34556.2 |
| diguanylate cyclase domain-containing protein | VSVS12_RS05390 | P46139 | Negative | 1139075 - 1140697 | 62093.8 |
| na+/h+ antiporter nhac family protein | VSVS12_RS05395 | P44263 | Negative | 1140906 - 1142342 | 50434.5 |
| plp-dependent aspartate aminotransferase family protein | VSVS12_RS05400 | Q83A83 | Negative | 1142346 - 1143497 | 41550.5 |
| glucosaminidase domain-containing protein | VSVS12_RS05405 | Not Available | Negative | 1143712 - 1144620 | 34015.4 |
| gntr family transcriptional regulator | VSVS12_RS05410 | P13669 | Negative | 1144755 - 1145483 | 27037.6 |
| transketolase family protein | VSVS12_RS05415 | Q58092 | Negative | 1145646 - 1146587 | 33827.8 |
| transketolase | VSVS12_RS05420 | Q58094 | Negative | 1146584 - 1147435 | 30765.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



