Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methionine--trna ligase | VSVS12_RS05325 | Q87N07 | Negative | 1124853 - 1126910 | 77393.8 |
| iron-sulfur cluster carrier protein apbc | VSVS12_RS05330 | P0AF09 | Positive | 1127069 - 1128142 | 38909.7 |
| uridine kinase | VSVS12_RS05335 | Q87N09 | Positive | 1128387 - 1129028 | 24202.5 |
| asma family protein | VSVS12_RS05340 | P28249 | Positive | 1129200 - 1131329 | 76151.4 |
| cob(i)yrinic acid a,c-diamide adenosyltransferase | VSVS12_RS05345 | P31570 | Negative | 1131440 - 1132045 | 22310.7 |
| low molecular weight protein-tyrosine-phosphatase | VSVS12_RS05350 | Q55535 | Positive | 1132176 - 1132625 | 16669.7 |
| sdr family oxidoreductase | VSVS12_RS05355 | Not Available | Negative | 1132648 - 1133310 | 24038.2 |
| vc2046/so_2500 family protein | VSVS12_RS05360 | Not Available | Negative | 1133497 - 1134000 | 18971.2 |
| superoxide dismutase | VSVS12_RS05365 | P09213 | Negative | 1134124 - 1134708 | 21471.0 |
| grx4 family monothiol glutaredoxin | VSVS12_RS05370 | P0AC71 | Positive | 1135096 - 1135431 | 12248.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



