Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycine cleavage system protein r | VSVS12_RS05175 | Not Available | Negative | 1094154 - 1094696 | 19760.6 |
| 4-hydroxy-tetrahydrodipicolinate synthase | VSVS12_RS05180 | Q7MIL2 | Positive | 1095032 - 1095910 | 31450.7 |
| outer membrane protein assembly factor bamc | VSVS12_RS05185 | B7VIM1 | Positive | 1095964 - 1096986 | 38339.5 |
| na+/h+ antiporter family protein | VSVS12_RS05190 | P46231 | Negative | 1097104 - 1098429 | 45999.8 |
| ribonuclease t | VSVS12_RS05195 | A7MUL2 | Negative | 1098529 - 1099188 | 24272.9 |
| flagellar protein moty | VSVS12_RS05200 | Q9S3P9 | Positive | 1099481 - 1100362 | 33189.3 |
| duf2753 domain-containing protein | VSVS12_RS05205 | P46234 | Negative | 1100471 - 1100908 | 16515.0 |
| lactoylglutathione lyase | VSVS12_RS05210 | P46235 | Negative | 1101046 - 1101462 | 14980.6 |
| endonuclease iii | VSVS12_RS05215 | P0AB84 | Negative | 1101581 - 1102216 | 23759.8 |
| electron transport complex subunit e | VSVS12_RS05220 | Q8D885 | Negative | 1102355 - 1103044 | 24643.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



