Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ai-2e family transporter | VSVS12_RS05085 | P43969 | Positive | 1070158 - 1071222 | 38867.8 |
| methyl-accepting chemotaxis protein | VSVS12_RS05090 | G3XD24 | Positive | 1071417 - 1073288 | 67221.2 |
| uracil-dna glycosylase family protein | VSVS12_RS22520 | P44411 | Negative | 1073370 - 1073507 | 5254.36 |
| hypothetical protein | VSVS12_RS23170 | Not Available | Negative | 1073910 - 1074083 | 6662.62 |
| m48 family metallopeptidase | VSVS12_RS05095 | Not Available | Negative | 1074094 - 1074870 | 30116.5 |
| type i restriction endonuclease subunit r | VSVS12_RS05100 | O05052 | Negative | 1074873 - 1078160 | 123851.0 |
| duf6933 domain-containing protein | VSVS12_RS05105 | Not Available | Negative | 1078203 - 1079039 | 32515.3 |
| restriction endonuclease subunit s | VSVS12_RS05110 | Not Available | Negative | 1079105 - 1080346 | 46489.0 |
| type i restriction-modification system subunit m | VSVS12_RS05115 | Q58617 | Negative | 1080336 - 1081853 | 56427.8 |
| nucleotidyl transferase abieii/abigii toxin family protein | VSVS12_RS05120 | Not Available | Negative | 1081873 - 1082814 | 35797.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



