Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminoacyl-trna hydrolase | VSVS12_RS04985 | A7MY77 | Negative | 1050847 - 1051437 | 21521.2 |
| ribose-phosphate pyrophosphokinase | VSVS12_RS04990 | Q87RN8 | Negative | 1051634 - 1052578 | 34035.0 |
| 4-(cytidine 5'-diphospho)-2-c-methyl-d-erythritol kinase | VSVS12_RS04995 | B7VKH0 | Negative | 1052608 - 1053480 | 31999.9 |
| lipoprotein insertase outer membrane protein lolb | VSVS12_RS05000 | Q7MMY8 | Negative | 1053480 - 1054097 | 23203.6 |
| glutamyl-trna reductase | VSVS12_RS05005 | B7VKH2 | Positive | 1054385 - 1055644 | 45939.1 |
| peptide chain release factor 1 | VSVS12_RS05010 | Q87RN4 | Positive | 1055668 - 1056756 | 40338.4 |
| peptide chain release factor n(5)-glutamine methyltransferase | VSVS12_RS05015 | Q9KQ26 | Positive | 1056761 - 1057615 | 31354.1 |
| sirb2 family protein | VSVS12_RS05020 | Q46755 | Positive | 1057632 - 1058003 | 13603.4 |
| sirb1 family protein | VSVS12_RS05025 | Q9KQ28 | Positive | 1058016 - 1058825 | 30881.8 |
| 3-deoxy-8-phosphooctulonate synthase | VSVS12_RS05030 | Q8DFG3 | Positive | 1058873 - 1059724 | 30909.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



