Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fe3+-citrate abc transporter substrate-binding protein | VSVS12_RS04780 | Not Available | Negative | 1025758 - 1026264 | 19453.9 |
| Trna-arg | Not Available | Not Available | Positive | 1026559 - 1026635 | Not Available |
| flagellar assembly protein flgt | VSVS12_RS04790 | Not Available | Negative | 1026689 - 1027825 | 42392.6 |
| flgo family outer membrane protein | VSVS12_RS04795 | Not Available | Positive | 1027989 - 1028624 | 23722.3 |
| flagellar assembly lipoprotein flgp | VSVS12_RS04800 | Not Available | Positive | 1028633 - 1029064 | 16218.7 |
| flagella synthesis protein flgn | VSVS12_RS04805 | Not Available | Negative | 1029152 - 1029577 | 15808.0 |
| flagellar biosynthesis anti-sigma factor flgm | VSVS12_RS04810 | Not Available | Negative | 1029591 - 1029908 | 10902.6 |
| flagellar basal body p-ring formation chaperone flga | VSVS12_RS04815 | Not Available | Negative | 1030027 - 1030773 | 27086.6 |
| chemotaxis protein chev | VSVS12_RS04820 | P37599 | Positive | 1030852 - 1031778 | 34100.4 |
| protein-glutamate o-methyltransferase | VSVS12_RS04825 | Q9X9K2 | Positive | 1031789 - 1032616 | 30938.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



