Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| molecular chaperone htpg | VSVS12_RS04730 | Q87RH5 | Positive | 1011957 - 1013861 | 72344.0 |
| adenylate kinase | VSVS12_RS04735 | A7MT47 | Positive | 1014209 - 1014853 | 23255.8 |
| ferrochelatase | VSVS12_RS04740 | Q87RH3 | Positive | 1015002 - 1015958 | 35949.4 |
| oligogalacturonate-specific porin kdgm family protein | VSVS12_RS04745 | Not Available | Positive | 1016480 - 1017145 | 24458.9 |
| duf411 domain-containing protein | VSVS12_RS04750 | Not Available | Negative | 1017220 - 1017657 | 15740.6 |
| heavy metal translocating p-type atpase | VSVS12_RS04755 | Q9KPZ7 | Negative | 1017672 - 1020419 | 97507.1 |
| porin | VSVS12_RS04760 | Q9KK91 | Positive | 1020899 - 1021978 | 39819.9 |
| duf2057 family protein | VSVS12_RS04765 | Not Available | Positive | 1022070 - 1022702 | 23445.2 |
| glutamate--trna ligase | VSVS12_RS04770 | Q87RL6 | Positive | 1022871 - 1024295 | 53577.6 |
| ompa family protein | VSVS12_RS04775 | P04845 | Positive | 1024712 - 1025671 | 34527.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



