Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sulfate transporter cysz | VSVS12_RS04630 | Q87RJ6 | Negative | 994314 - 995066 | 28402.3 |
| cell division protein zipa | VSVS12_RS04635 | Q87RJ5 | Positive | 995281 - 996345 | 39134.1 |
| nad-dependent dna ligase liga | VSVS12_RS04640 | A7MT54 | Positive | 996537 - 998546 | 73390.3 |
| porin | VSVS12_RS04645 | Not Available | Positive | 999052 - 1000155 | 39441.1 |
| duf2057 domain-containing protein | VSVS12_RS04650 | Not Available | Positive | 1000235 - 1000867 | 23681.2 |
| hypothetical protein | VSVS12_RS04655 | Not Available | Negative | 1000938 - 1001123 | 6642.1 |
| nfed family protein | VSVS12_RS04660 | P0AAS3 | Negative | 1001368 - 1001817 | 16654.3 |
| spfh domain-containing protein | VSVS12_RS04665 | P0AA55 | Negative | 1001858 - 1002778 | 33543.7 |
| co-chaperone ybbn | VSVS12_RS04670 | P77395 | Negative | 1002931 - 1003785 | 31698.0 |
| sdr family oxidoreductase | VSVS12_RS04675 | P0AFP5 | Negative | 1004111 - 1004938 | 30428.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



