Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| serine hydrolase | VSVS12_RS04530 | P0AEB4 | Negative | 971708 - 972886 | 43015.4 |
| septal ring lytic transglycosylase rlpa family protein | VSVS12_RS04535 | Q9KTF4 | Negative | 972976 - 973812 | 31025.7 |
| rod shape-determining protein roda | VSVS12_RS04540 | P0ABG8 | Negative | 973812 - 974933 | 40892.7 |
| penicillin-binding protein 2 | VSVS12_RS04545 | P0AD67 | Negative | 974933 - 976816 | 71024.0 |
| 23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmh | VSVS12_RS04550 | Q8DFD8 | Negative | 976823 - 977293 | 17490.3 |
| ribosome silencing factor | VSVS12_RS04555 | P0AAT7 | Negative | 977297 - 977614 | 11721.0 |
| dna polymerase iii subunit delta | VSVS12_RS04560 | P28630 | Negative | 977680 - 978693 | 38580.8 |
| lps assembly lipoprotein lpte | VSVS12_RS04565 | A8GB20 | Negative | 978702 - 979364 | 24935.7 |
| leucine--trna ligase | VSVS12_RS04570 | B7VKF7 | Negative | 979527 - 982103 | 96714.6 |
| zinc ribbon-containing protein | VSVS12_RS04575 | P0AAU1 | Positive | 982351 - 982821 | 17741.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



