Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tigr03503 family protein | VSVS12_RS04430 | Not Available | Positive | 951449 - 952735 | 48150.0 |
| is4 family transposase | VSVS12_RS04435 | Not Available | Positive | 952893 - 954224 | 51609.0 |
| acyl-coa dehydrogenase fade | VSVS12_RS04440 | Q47146 | Negative | 954290 - 956737 | 89554.7 |
| d-sedoheptulose 7-phosphate isomerase | VSVS12_RS04445 | Q9KPY2 | Positive | 957072 - 957650 | 20836.9 |
| class ii glutamine amidotransferase | VSVS12_RS04450 | Q47147 | Positive | 957735 - 958583 | 31908.9 |
| proline--trna ligase | VSVS12_RS04455 | Q8DBH9 | Negative | 959522 - 961237 | 63062.6 |
| trna (n6-threonylcarbamoyladenosine(37)-n6)-methyltransferase trmo | VSVS12_RS04460 | P28634 | Negative | 961347 - 962042 | 25683.8 |
| type b 50s ribosomal protein l31 | VSVS12_RS04465 | A7N1X4 | Positive | 962198 - 962455 | 9935.73 |
| type b 50s ribosomal protein l36 | VSVS12_RS04470 | A7N1X3 | Positive | 962452 - 962577 | 4783.12 |
| metq/nlpa family lipoprotein | VSVS12_RS04475 | Q9KTJ7 | Negative | 962692 - 963501 | 29106.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



