Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyl-coa carboxylase carboxyl transferase subunit alpha | VSVS12_RS04380 | Q8DBE5 | Positive | 942471 - 943430 | 35404.6 |
| trna lysidine(34) synthetase tils | VSVS12_RS04385 | Q8DBE4 | Positive | 943526 - 944836 | 49178.5 |
| nitrogen regulatory protein p-ii | VSVS12_RS04390 | P11671 | Positive | 944912 - 945250 | 12430.0 |
| endonuclease/exonuclease/phosphatase family protein | VSVS12_RS04395 | C3LPP2 | Positive | 945370 - 946260 | 33024.5 |
| yip1 family protein | VSVS12_RS04400 | Not Available | Negative | 946246 - 946932 | 25567.4 |
| lysm peptidoglycan-binding domain-containing protein | VSVS12_RS04405 | P0AEZ8 | Negative | 946929 - 948500 | 57822.1 |
| hydroxyacylglutathione hydrolase | VSVS12_RS04410 | B7VIP5 | Negative | 948571 - 949329 | 28346.7 |
| class i sam-dependent methyltransferase | VSVS12_RS04415 | P75672 | Positive | 949363 - 950109 | 28775.9 |
| ribonuclease hi | VSVS12_RS04420 | B7VIP1 | Negative | 950173 - 950640 | 17695.1 |
| dna polymerase iii subunit epsilon | VSVS12_RS04425 | P0A1H0 | Positive | 950697 - 951440 | 27692.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



