Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | VSVS12_RS04330 | A7MXZ4 | Positive | 929080 - 930288 | 43731.9 |
| sigma e protease regulator rsep | VSVS12_RS04335 | Q9KPV9 | Positive | 930285 - 931643 | 49072.9 |
| outer membrane protein assembly factor bama | VSVS12_RS04340 | Q5PD65 | Positive | 931683 - 934085 | 88579.4 |
| omph family outer membrane protein | VSVS12_RS04345 | Q9KPW1 | Positive | 934100 - 934609 | 19035.1 |
| udp-3-o-(3-hydroxymyristoyl)glucosamine n-acyltransferase | VSVS12_RS04350 | Q87ME7 | Positive | 934616 - 935647 | 36048.3 |
| 3-hydroxyacyl-acp dehydratase fabz | VSVS12_RS04355 | Q8DBF0 | Positive | 935799 - 936251 | 16847.4 |
| acyl-acp--udp-n-acetylglucosamine o-acyltransferase | VSVS12_RS04360 | A7MY03 | Positive | 936253 - 937041 | 28247.0 |
| lipid-a-disaccharide synthase | VSVS12_RS04365 | A7MY02 | Positive | 937121 - 938272 | 42731.2 |
| ribonuclease hii | VSVS12_RS04370 | A7MY01 | Positive | 938269 - 938898 | 22905.9 |
| dna polymerase iii subunit alpha | VSVS12_RS04375 | P52022 | Positive | 938954 - 942433 | 130139.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



