Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamate 5-kinase | VSVS12_RS04225 | A7MWT6 | Positive | 909559 - 910698 | 40085.2 |
| glutamate-5-semialdehyde dehydrogenase | VSVS12_RS04230 | Q87RU9 | Positive | 910719 - 911969 | 44553.6 |
| transcriptional regulator nrdr | VSVS12_RS04235 | Q8DF95 | Positive | 912127 - 912576 | 17043.5 |
| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase ribd | VSVS12_RS04240 | P25539 | Positive | 912589 - 913695 | 40290.6 |
| riboflavin synthase | VSVS12_RS04245 | P51961 | Positive | 913698 - 914351 | 23619.2 |
| bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/gtp cyclohydrolase ii | VSVS12_RS04250 | P51962 | Positive | 914426 - 915535 | 40399.2 |
| 6,7-dimethyl-8-ribityllumazine synthase | VSVS12_RS04255 | A7MWU0 | Positive | 915685 - 916155 | 16416.8 |
| transcription antitermination factor nusb | VSVS12_RS04260 | B7VJA4 | Positive | 916155 - 916622 | 17546.0 |
| thiamine-phosphate kinase | VSVS12_RS04265 | P55881 | Positive | 916714 - 917685 | 34570.1 |
| phosphatidylglycerophosphatase a | VSVS12_RS04270 | P18200 | Positive | 917695 - 918198 | 18256.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



