Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sodium-dependent transporter | VSVS12_RS04175 | Not Available | Positive | 897352 - 898713 | 48964.0 |
| is4 family transposase | VSVS12_RS04180 | Not Available | Positive | 898850 - 900181 | 51541.9 |
| succinylglutamate desuccinylase/aspartoacylase family protein | VSVS12_RS04185 | Not Available | Negative | 900225 - 901289 | 38863.9 |
| 30s ribosomal protein s6--l-glutamate ligase | VSVS12_RS04190 | A5F5Z2 | Negative | 901276 - 902181 | 32420.8 |
| atp-dependent zinc protease | VSVS12_RS04195 | A8H4D4 | Negative | 902181 - 902624 | 17125.7 |
| aminoacyl-histidine dipeptidase | VSVS12_RS04200 | P15288 | Negative | 903041 - 904513 | 53373.6 |
| ncs2 family permease | VSVS12_RS04205 | P31466 | Positive | 905537 - 906826 | 44508.6 |
| oxytetracycline resistance phosphoribosyltransferase domain-containing protein tet(34) | VSVS12_RS04210 | A7MWU9 | Positive | 907114 - 907578 | 17449.9 |
| esterase frsa | VSVS12_RS04215 | Q87RV2 | Positive | 907720 - 908967 | 46928.5 |
| sigma factor-binding protein crl | VSVS12_RS04220 | Q8DF92 | Positive | 909051 - 909440 | 15228.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



