Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lon peptidase substrate-binding domain-containing protein | VSVS12_RS04075 | Not Available | Positive | 879295 - 879867 | 22133.7 |
| sigma-70 family rna polymerase sigma factor | VSVS12_RS04080 | Q3IYV6 | Positive | 879924 - 880508 | 22557.2 |
| chrr family anti-sigma-e factor | VSVS12_RS04085 | Not Available | Positive | 880505 - 881167 | 24877.7 |
| ampg family muropeptide mfs transporter | VSVS12_RS04090 | Q4ULW4 | Negative | 881228 - 882604 | 50876.7 |
| peptidylprolyl isomerase | VSVS12_RS04095 | P42693 | Negative | 882690 - 883235 | 19753.5 |
| yajg family lipoprotein | VSVS12_RS04100 | Not Available | Negative | 883235 - 883807 | 20999.1 |
| methyltransferase | VSVS12_RS04105 | A7N1U8 | Negative | 883867 - 884997 | 42108.5 |
| bola family transcriptional regulator | VSVS12_RS04110 | Q56585 | Positive | 885147 - 885452 | 11472.8 |
| na(+)-translocating nadh-quinone reductase subunit a | VSVS12_RS04115 | Q56586 | Positive | 885878 - 887218 | 48554.6 |
| nadh:ubiquinone reductase (na(+)-transporting) subunit b | VSVS12_RS04120 | Q9RFW0 | Positive | 887222 - 888463 | 45237.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



