Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| co-chaperone hscb | VSVS12_RS04025 | Q7MNF9 | Positive | 870202 - 870717 | 19868.8 |
| fe-s protein assembly chaperone hsca | VSVS12_RS04030 | A7MU49 | Positive | 870738 - 872591 | 65908.6 |
| isc system 2fe-2s type ferredoxin | VSVS12_RS04035 | P0A9R5 | Positive | 872603 - 872941 | 12298.5 |
| fe-s cluster assembly protein iscx | VSVS12_RS04040 | P0C0M0 | Positive | 873040 - 873234 | 7638.84 |
| aminopeptidase pepb | VSVS12_RS04045 | A7MU37 | Positive | 873433 - 874719 | 46256.9 |
| nucleoside-diphosphate kinase | VSVS12_RS04050 | Q8DEZ5 | Positive | 874789 - 875214 | 15774.7 |
| cysteine desulfurase csda | VSVS12_RS04055 | Q9KPQ7 | Negative | 875304 - 876515 | 43827.3 |
| dj-1 family glyoxalase iii | VSVS12_RS04060 | Q46948 | Negative | 876515 - 877114 | 21606.3 |
| 2-dehydropantoate 2-reductase | VSVS12_RS04065 | Q9KPQ9 | Negative | 877119 - 878000 | 32525.7 |
| outer membrane protein ompk | VSVS12_RS04070 | P59570 | Negative | 878104 - 878946 | 31691.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



