Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-trp | Not Available | Not Available | Positive | 861511 - 861587 | Not Available |
| is630 family transposase | VSVS12_RS22505 | P55614 | Negative | 861692 - 862727 | 40044.9 |
| uracil-dna glycosylase family protein | VSVS12_RS03980 | Not Available | Positive | 863560 - 864317 | 26394.6 |
| is3 family transposase | VSVS12_RS22510 | Not Available | Negative | 864405 - 865642 | 47827.6 |
| inositol-1-monophosphatase | VSVS12_RS03995 | Q9KTY5 | Negative | 865748 - 866551 | 29107.0 |
| trna (cytosine(32)/uridine(32)-2'-o)-methyltransferase trmj | VSVS12_RS04000 | Q6D257 | Positive | 866730 - 867455 | 26811.2 |
| fe-s cluster assembly transcriptional regulator iscr | VSVS12_RS04005 | A7MU47 | Positive | 867575 - 868081 | 18160.6 |
| iscs subfamily cysteine desulfurase | VSVS12_RS04010 | Q87S28 | Positive | 868112 - 869326 | 44957.7 |
| fe-s cluster assembly scaffold iscu | VSVS12_RS04015 | P0ACD6 | Positive | 869377 - 869757 | 13497.0 |
| iron-sulfur cluster assembly protein isca | VSVS12_RS04020 | A8GHY1 | Positive | 869825 - 870148 | 11571.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



