Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbon starvation protein a | VSVS12_RS03810 | O86233 | Negative | 825937 - 827424 | 53350.2 |
| duf2799 domain-containing protein | VSVS12_RS03815 | Not Available | Positive | 827636 - 827983 | 12862.8 |
| anhydro-n-acetylmuramic acid kinase | VSVS12_RS03820 | Q87S80 | Negative | 828095 - 829210 | 40500.4 |
| beta-n-acetylhexosaminidase | VSVS12_RS03825 | Q9KU37 | Positive | 829311 - 830300 | 36245.5 |
| two-component system response regulator btsr | VSVS12_RS03830 | Q9KU36 | Negative | 830429 - 831163 | 27467.5 |
| sensor histidine kinase | VSVS12_RS03835 | P0AD15 | Negative | 831173 - 832846 | 61363.1 |
| 3-deoxy-7-phosphoheptulonate synthase | VSVS12_RS03840 | P0A1B6 | Positive | 833091 - 834164 | 39590.0 |
| bifunctional chorismate mutase/prephenate dehydrogenase | VSVS12_RS03845 | Q02287 | Positive | 834186 - 835313 | 42125.7 |
| m23 family metallopeptidase | VSVS12_RS03850 | P44693 | Negative | 835353 - 836336 | 36176.8 |
| pilz domain-containing protein | VSVS12_RS03855 | Q9HVI1 | Negative | 836346 - 836717 | 13903.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



