Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| na/pi symporter | VSVS12_RS03760 | Q06496 | Negative | 814732 - 815877 | 40231.8 |
| transcriptional activator nhar | VSVS12_RS03765 | P52692 | Positive | 816303 - 817193 | 33607.6 |
| metalloregulator arsr/smtb family transcription factor | VSVS12_RS03770 | P52695 | Positive | 817312 - 817608 | 11294.9 |
| 30s ribosomal protein s20 | VSVS12_RS03775 | Q87S93 | Negative | 817703 - 817963 | 9495.73 |
| murein biosynthesis integral membrane protein murj | VSVS12_RS03780 | O34238 | Positive | 818223 - 819785 | 56865.6 |
| bifunctional riboflavin kinase/fad synthetase | VSVS12_RS03785 | P0AG42 | Positive | 819851 - 820786 | 34762.3 |
| isoleucine--trna ligase | VSVS12_RS03790 | A7MTD6 | Positive | 820851 - 823691 | 105458.0 |
| signal peptidase ii | VSVS12_RS03795 | A7MTD7 | Positive | 823794 - 824300 | 19261.4 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | VSVS12_RS03800 | P0AEM2 | Positive | 824426 - 824857 | 15302.2 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | VSVS12_RS03805 | Q87S87 | Positive | 824881 - 825846 | 35729.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



