Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcription termination factor nusa | VSVS12_RS03655 | P0AFF8 | Positive | 786612 - 788099 | 55042.2 |
| translation initiation factor if-2 | VSVS12_RS03660 | A7MZI5 | Positive | 788121 - 790826 | 98062.2 |
| 30s ribosome-binding factor rbfa | VSVS12_RS03665 | Q87M03 | Positive | 790938 - 791333 | 15313.6 |
| trna pseudouridine(55) synthase trub | VSVS12_RS03670 | A7MZI3 | Positive | 791333 - 792286 | 35421.7 |
| duf1499 domain-containing protein | VSVS12_RS03675 | Not Available | Negative | 792447 - 792881 | 15954.5 |
| glutamate synthase subunit beta | VSVS12_RS03680 | P9WN18 | Negative | 793055 - 794524 | 53465.9 |
| glutamate synthase large subunit | VSVS12_RS03685 | P55037 | Negative | 794524 - 799071 | 167374.0 |
| tigr01212 family radical sam protein | VSVS12_RS03690 | P0ADW7 | Positive | 799603 - 800532 | 34457.4 |
| ggdef domain-containing protein | VSVS12_RS03695 | Q55434 | Positive | 800604 - 802352 | 65622.3 |
| aerobic respiration two-component sensor histidine kinase arcb | VSVS12_RS03700 | P58363 | Positive | 802433 - 804778 | 88307.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



