Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcription elongation factor grea | VSVS12_RS03605 | Q87LZ2 | Positive | 779167 - 779640 | 17570.9 |
| ribosome assembly rna-binding protein yhby | VSVS12_RS03610 | P0AGK6 | Negative | 779721 - 780017 | 10952.6 |
| 23s rrna (uridine(2552)-2'-o)-methyltransferase rlme | VSVS12_RS03615 | Q87LZ4 | Positive | 780156 - 780785 | 23315.1 |
| atp-dependent zinc metalloprotease ftsh | VSVS12_RS03620 | Q6LUJ8 | Positive | 780893 - 782857 | 72101.5 |
| dihydropteroate synthase | VSVS12_RS03625 | P0AC14 | Positive | 782909 - 783739 | 30028.4 |
| phosphoglucosamine mutase | VSVS12_RS03630 | Q87LZ7 | Positive | 783756 - 785096 | 47410.1 |
| preprotein translocase subunit secg | VSVS12_RS03635 | P0AGA1 | Positive | 785351 - 785689 | 11573.9 |
| Trna-leu | Not Available | Not Available | Positive | 785699 - 785782 | Not Available |
| Trna-met | Not Available | Not Available | Positive | 785839 - 785915 | Not Available |
| ribosome maturation factor rimp | VSVS12_RS03650 | A5F924 | Positive | 786122 - 786577 | 16777.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



