Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | VSVS12_RS03555 | Not Available | Positive | 765388 - 765558 | 6156.64 |
| glutamate-1-semialdehyde 2,1-aminomutase | VSVS12_RS03560 | Q87LY3 | Negative | 765599 - 766891 | 45743.0 |
| iron-sulfur cluster insertion protein erpa | VSVS12_RS03565 | B7VJJ4 | Positive | 767150 - 767518 | 13110.4 |
| efflux rnd transporter periplasmic adaptor subunit | VSVS12_RS03570 | P52477 | Positive | 767797 - 768900 | 39851.3 |
| efflux rnd transporter permease subunit | VSVS12_RS03575 | P25197 | Positive | 768909 - 772076 | 116253.0 |
| peptidoglycan dd-metalloendopeptidase family protein | VSVS12_RS03580 | P0AFT0 | Negative | 772183 - 773469 | 48087.8 |
| tyrosine--trna ligase | VSVS12_RS03585 | Q87LY8 | Positive | 773598 - 774785 | 43862.1 |
| magnesium transporter | VSVS12_RS03590 | Not Available | Positive | 775230 - 776075 | 30373.8 |
| serine-type d-ala-d-ala carboxypeptidase | VSVS12_RS03595 | P45161 | Negative | 776054 - 777481 | 52693.7 |
| porin | VSVS12_RS03600 | Q87LZ1 | Negative | 777583 - 778644 | 37691.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



