Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| p-ii family nitrogen regulator | VSVS12_RS03455 | Q9CJK1 | Positive | 737788 - 738126 | 12377.0 |
| ammonium transporter | VSVS12_RS03460 | P54147 | Positive | 738150 - 739379 | 43050.6 |
| fe(3+) abc transporter substrate-binding protein | VSVS12_RS03465 | P72827 | Positive | 739531 - 740544 | 37333.5 |
| iron abc transporter permease | VSVS12_RS03470 | Not Available | Positive | 740632 - 742257 | 60374.2 |
| abc transporter atp-binding protein | VSVS12_RS03475 | Q38VW6 | Positive | 742257 - 743288 | 38116.7 |
| ribbon-helix-helix domain-containing protein | VSVS12_RS03480 | Not Available | Negative | 743285 - 743563 | 10223.3 |
| dj-1/pfpi family protein | VSVS12_RS03485 | Q9M8R4 | Negative | 743661 - 744221 | 20496.5 |
| phosphoglucomutase/phosphomannomutase family protein | VSVS12_RS03490 | Q68BJ6 | Negative | 744383 - 745795 | 52285.5 |
| gh36-type glycosyl hydrolase domain-containing protein | VSVS12_RS03495 | Q76IQ9 | Negative | 745845 - 748253 | 89999.6 |
| beta-n-acetylhexosaminidase | VSVS12_RS03500 | P96155 | Negative | 748347 - 750260 | 72604.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



