Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase-binding protein dksa | VSVS12_RS03405 | P0ABS3 | Negative | 721507 - 721953 | 17210.5 |
| dna/rna nuclease sfsa | VSVS12_RS03410 | A7MYW9 | Negative | 722083 - 722802 | 26778.0 |
| atp-dependent helicase hrpb | VSVS12_RS03415 | P37024 | Positive | 722831 - 725350 | 93402.6 |
| penicillin-binding protein 1b | VSVS12_RS03420 | Q9KUC0 | Positive | 725378 - 727744 | 88422.7 |
| patatin-like phospholipase family protein | VSVS12_RS03425 | O34731 | Positive | 727866 - 730109 | 83464.6 |
| bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase | VSVS12_RS03430 | Q8ZRS8 | Positive | 730387 - 732975 | 93493.7 |
| glycerate kinase | VSVS12_RS03435 | P42100 | Negative | 733236 - 734369 | 38802.9 |
| gntp family permease | VSVS12_RS03440 | Q57493 | Negative | 734389 - 735654 | 42070.1 |
| sugar diacid recognition domain-containing protein | VSVS12_RS03445 | P37047 | Negative | 735788 - 736939 | 43490.8 |
| yacl family protein | VSVS12_RS03450 | A7MYX4 | Positive | 737186 - 737557 | 14182.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



