Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uracil-dna glycosylase family protein | VSVS12_RS03355 | Q14SY0 | Positive | 711791 - 712270 | 16316.7 |
| is4 family transposase | VSVS12_RS03360 | Not Available | Positive | 712377 - 713585 | 45975.1 |
| uracil-dna glycosylase family protein | VSVS12_RS03365 | Q55415 | Positive | 713600 - 714802 | 43308.4 |
| abc transporter atp-binding protein | VSVS12_RS03370 | P36879 | Positive | 715003 - 715926 | 34568.8 |
| abc transporter permease | VSVS12_RS03375 | P0AFN8 | Positive | 715928 - 716698 | 28460.4 |
| pantoate--beta-alanine ligase | VSVS12_RS03380 | A7MYX3 | Negative | 716864 - 717766 | 33428.9 |
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | VSVS12_RS03385 | Q87LV2 | Negative | 717778 - 718572 | 28663.8 |
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase | VSVS12_RS03390 | Not Available | Negative | 718596 - 719081 | 18107.7 |
| polynucleotide adenylyltransferase pcnb | VSVS12_RS03395 | P0ABF3 | Negative | 719078 - 720454 | 53340.7 |
| trna glutamyl-q(34) synthetase gluqrs | VSVS12_RS03400 | Q87LV6 | Negative | 720540 - 721430 | 33291.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



