Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| site-specific tyrosine recombinase xerd | VSVS12_RS03305 | Q7ZAJ0 | Positive | 698084 - 698980 | 34300.4 |
| bifunctional protein-disulfide isomerase/oxidoreductase dsbc | VSVS12_RS03310 | P0AEG7 | Positive | 699016 - 699762 | 27281.7 |
| single-stranded-dna-specific exonuclease recj | VSVS12_RS03315 | P21893 | Positive | 699805 - 701544 | 63883.5 |
| pyruvate dehydrogenase complex transcriptional repressor pdhr | VSVS12_RS03320 | P0ACM1 | Positive | 702050 - 702814 | 28789.5 |
| pyruvate dehydrogenase (acetyl-transferring), homodimeric type | VSVS12_RS03325 | P0AFG9 | Positive | 702846 - 705509 | 99261.9 |
| pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase | VSVS12_RS03330 | P06959 | Positive | 705539 - 707428 | 65166.1 |
| dihydrolipoyl dehydrogenase | VSVS12_RS03335 | O50286 | Positive | 707712 - 709142 | 51013.9 |
| luxr/hapr/opar family quorum-sensing transcriptional regulator | VSVS12_RS03340 | P21308 | Negative | 709225 - 709839 | 23545.1 |
| hypoxanthine phosphoribosyltransferase | VSVS12_RS03345 | P18134 | Positive | 710247 - 710777 | 20045.2 |
| carbonate dehydratase | VSVS12_RS03350 | P61517 | Negative | 710877 - 711545 | 25172.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



