Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-2-hydroxyacid dehydrogenase | VSVS12_RS03260 | P45250 | Positive | 686741 - 687703 | 35014.1 |
| valine--trna ligase | VSVS12_RS03265 | Q5E7U0 | Negative | 687794 - 690667 | 108870.0 |
| dna polymerase iii subunit chi | VSVS12_RS03270 | P28905 | Negative | 690874 - 691323 | 17005.1 |
| leucyl aminopeptidase | VSVS12_RS03275 | A7MSE5 | Negative | 691479 - 692999 | 55064.3 |
| lps export abc transporter permease lptf | VSVS12_RS03280 | P0AFA0 | Positive | 693192 - 694295 | 40610.2 |
| lps export abc transporter permease lptg | VSVS12_RS03285 | P0ADC7 | Positive | 694299 - 695369 | 39696.2 |
| membrane lipoprotein lipid attachment site-containing protein | VSVS12_RS22950 | Not Available | Negative | 695451 - 695573 | 4408.31 |
| carboxylating nicotinate-nucleotide diphosphorylase | VSVS12_RS03290 | P30012 | Negative | 695739 - 696626 | 31955.1 |
| 1,6-anhydro-n-acetylmuramyl-l-alanine amidase ampd | VSVS12_RS03295 | E1W818 | Positive | 696750 - 697292 | 20661.5 |
| flavodoxin fldb | VSVS12_RS03300 | P0ABY6 | Negative | 697394 - 697915 | 19432.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



