Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l21 | VSVS12_RS03155 | A7MWE0 | Positive | 665420 - 665731 | 11563.0 |
| 50s ribosomal protein l27 | VSVS12_RS03160 | A7N0G1 | Positive | 665753 - 666013 | 9279.18 |
| obg family gtpase cgta | VSVS12_RS03165 | Q87SU2 | Positive | 666301 - 667476 | 43338.3 |
| threonine/serine exporter thre family protein | VSVS12_RS03170 | A0A0H3FRB6 | Positive | 667675 - 668442 | 27739.6 |
| threonine/serine exporter family protein | VSVS12_RS03175 | C6DEZ3 | Positive | 668439 - 668912 | 17380.2 |
| type 3 dihydrofolate reductase | VSVS12_RS03180 | P12833 | Positive | 668955 - 669434 | 17762.4 |
| bis(5'-nucleosyl)-tetraphosphatase (symmetrical) apah | VSVS12_RS03185 | Q87ST8 | Negative | 669581 - 670387 | 30867.8 |
| co2+/mg2+ efflux protein apag | VSVS12_RS03190 | A7MWC5 | Negative | 670397 - 670777 | 14073.8 |
| 16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferase rsma | VSVS12_RS03195 | Q8DED2 | Negative | 670841 - 671647 | 30455.1 |
| 4-hydroxythreonine-4-phosphate dehydrogenase pdxa | VSVS12_RS03200 | Q87ST5 | Negative | 671644 - 672633 | 35531.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



