Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | VSVS12_RS03105 | Not Available | Positive | 653467 - 655689 | 84367.2 |
| glycosyl hydrolase 2 galactose-binding domain-containing protein | VSVS12_RS03110 | Not Available | Positive | 656141 - 656941 | 30548.3 |
| duf2061 domain-containing protein | VSVS12_RS03115 | Not Available | Negative | 656949 - 657347 | 14721.0 |
| universal stress protein | VSVS12_RS03120 | Not Available | Negative | 657501 - 657938 | 16211.9 |
| trap transporter permease | VSVS12_RS03125 | Not Available | Negative | 657982 - 660561 | 92871.8 |
| taxi family trap transporter solute-binding subunit | VSVS12_RS03130 | Not Available | Negative | 660779 - 661747 | 34349.7 |
| transcriptional regulator argr | VSVS12_RS03135 | Q8DEC1 | Negative | 662081 - 662551 | 17027.6 |
| malate dehydrogenase | VSVS12_RS03140 | A7MWD3 | Positive | 662882 - 663817 | 32037.7 |
| hypothetical protein | VSVS12_RS03145 | Not Available | Positive | 663913 - 664104 | 7219.62 |
| octaprenyl diphosphate synthase | VSVS12_RS03150 | P0AD57 | Negative | 664178 - 665149 | 35275.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



