Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| replication initiator protein rctb domain-containing protein | VSVS12_RS15705 | Not Available | Negative | 188506 - 190476 | 75238.4 |
| para family protein | VSVS12_RS15715 | P07620 | Positive | 191723 - 192940 | 45984.0 |
| parb/repb/spo0j family partition protein | VSVS12_RS15720 | P07621 | Positive | 192948 - 193919 | 36095.3 |
| isl3 family transposase | VSVS12_RS15725 | Not Available | Negative | 193979 - 195172 | 46270.4 |
| trna(met) cytidine acetyltransferase tmca | VSVS12_RS15730 | Q9KKJ5 | Positive | 195387 - 197483 | 78265.9 |
| stas domain-containing protein | VSVS12_RS15735 | Not Available | Positive | 198190 - 198489 | 11616.9 |
| fused response regulator/phosphatase | VSVS12_RS15740 | O78428 | Positive | 198500 - 200197 | 63237.8 |
| formate c-acetyltransferase | VSVS12_RS15745 | P09373 | Negative | 200327 - 202624 | 85797.8 |
| recombinase family protein | VSVS12_RS15750 | Not Available | Positive | 202927 - 203571 | 24470.2 |
| multidrug effflux mfs transporter | VSVS12_RS15755 | B7LK52 | Positive | 203568 - 204752 | 42985.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



