Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipopolysaccharide assembly protein lapb | VSVS12_RS02955 | Not Available | Positive | 617508 - 618752 | 45117.4 |
| uracil-dna glycosylase family protein | VSVS12_RS02960 | Q1D098 | Positive | 618742 - 619617 | 32810.6 |
| is4 family transposase | VSVS12_RS02965 | Not Available | Negative | 619635 - 620843 | 45975.1 |
| uracil-dna glycosylase family protein | VSVS12_RS02970 | P31741 | Positive | 620905 - 621804 | 32920.8 |
| type ii secretion system f family protein | VSVS12_RS02975 | Q5SK58 | Positive | 621813 - 623033 | 44868.6 |
| msha biogenesis protein mshf | VSVS12_RS02980 | Not Available | Positive | 623017 - 623496 | 18413.0 |
| prepilin-type n-terminal cleavage/methylation domain-containing protein | VSVS12_RS02985 | Not Available | Positive | 623577 - 624152 | 20636.3 |
| type ii secretion system protein | VSVS12_RS02990 | Not Available | Positive | 624189 - 624650 | 15551.4 |
| prepilin-type n-terminal cleavage/methylation domain-containing protein | VSVS12_RS02995 | Not Available | Positive | 624772 - 625239 | 16172.4 |
| prepilin-type n-terminal cleavage/methylation domain-containing protein | VSVS12_RS03000 | Not Available | Positive | 625239 - 625796 | 19916.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



