Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| excinuclease abc subunit uvra | VSVS12_RS02905 | Q7MHB5 | Negative | 604915 - 607737 | 103917.0 |
| utp--glucose-1-phosphate uridylyltransferase galu | VSVS12_RS02910 | Q9I291 | Negative | 607921 - 608793 | 32303.9 |
| luxr c-terminal-related transcriptional regulator | VSVS12_RS02915 | O54294 | Negative | 608912 - 609559 | 25019.2 |
| single-stranded dna-binding protein | VSVS12_RS02920 | Q87LA3 | Positive | 609858 - 610397 | 19965.3 |
| rnase e specificity factor csrd | VSVS12_RS02925 | P13518 | Positive | 610568 - 612574 | 76977.8 |
| msha biogenesis protein mshi | VSVS12_RS02930 | Not Available | Positive | 612582 - 614024 | 53312.7 |
| type 4a pilus biogenesis protein pilo | VSVS12_RS02935 | Not Available | Positive | 614021 - 614671 | 24641.8 |
| msha biogenesis protein mshk | VSVS12_RS02940 | Not Available | Positive | 614679 - 615002 | 11774.3 |
| pilus (msha type) biogenesis protein mshl | VSVS12_RS02945 | P35818 | Positive | 615018 - 616658 | 58781.3 |
| exea family protein | VSVS12_RS02950 | P45754 | Positive | 616665 - 617504 | 31417.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



