Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4426 domain-containing protein | VSVS12_RS02855 | Not Available | Negative | 594780 - 595211 | 15953.2 |
| duf167 family protein yggu | VSVS12_RS02860 | Q87LJ3 | Negative | 595242 - 595532 | 10590.1 |
| yggt family protein | VSVS12_RS02865 | P52059 | Negative | 595532 - 596089 | 20549.9 |
| pyrroline-5-carboxylate reductase | VSVS12_RS02870 | P52053 | Negative | 596131 - 596949 | 28984.8 |
| yggs family pyridoxal phosphate-dependent enzyme | VSVS12_RS02875 | Q9KUQ4 | Negative | 597000 - 597716 | 26216.3 |
| type iv pilus twitching motility protein pilt | VSVS12_RS02880 | P24559 | Positive | 597741 - 598772 | 37821.6 |
| pilt/pilu family type 4a pilus atpase | VSVS12_RS02885 | G3XCX3 | Positive | 598787 - 599887 | 40897.1 |
| lysine-sensitive aspartokinase 3 | VSVS12_RS02890 | P08660 | Negative | 599949 - 601301 | 48807.1 |
| alanine--glyoxylate aminotransferase family protein | VSVS12_RS02895 | Q54GT6 | Positive | 601765 - 602886 | 40689.3 |
| pgll family o-oligosaccharyltransferase | VSVS12_RS02900 | Not Available | Negative | 602966 - 604735 | 66878.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



