Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sodium:proton antiporter | VSVS12_RS02655 | G3XD29 | Negative | 563635 - 564918 | 47091.9 |
| methionine synthase | VSVS12_RS02660 | Q87L95 | Positive | 565088 - 568765 | 136341.0 |
| magnesium transporter | VSVS12_RS02665 | O34442 | Negative | 568848 - 570203 | 49112.1 |
| hpr family phosphocarrier protein | VSVS12_RS02670 | Q9KP46 | Negative | 570342 - 570620 | 9976.89 |
| rnase adapter rapz | VSVS12_RS02675 | C3LRJ5 | Negative | 570624 - 571487 | 32786.2 |
| pts iia-like nitrogen regulatory protein ptsn | VSVS12_RS02680 | P17162 | Negative | 571496 - 571942 | 16525.1 |
| ribosome hibernation promoting factor | VSVS12_RS02685 | P17161 | Negative | 571945 - 572232 | 11034.1 |
| rna polymerase factor sigma-54 | VSVS12_RS02690 | O08429 | Negative | 572257 - 573717 | 54837.7 |
| lps export abc transporter atp-binding protein | VSVS12_RS02695 | P45073 | Negative | 573761 - 574486 | 26864.5 |
| lipopolysaccharide transport periplasmic protein lpta | VSVS12_RS02700 | P0ADV3 | Negative | 574489 - 574986 | 18148.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



