Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| copper resistance protein nlpe | VSVS12_RS15655 | Not Available | Negative | 180112 - 180678 | 20177.3 |
| lysr family transcriptional regulator | VSVS12_RS15660 | Q01610 | Negative | 180942 - 181844 | 33755.0 |
| hlyd family secretion protein | VSVS12_RS15665 | Not Available | Positive | 181970 - 183019 | 38437.5 |
| duf2955 domain-containing protein | VSVS12_RS15670 | Not Available | Positive | 183032 - 184102 | 39725.9 |
| yebc/pmpr family dna-binding transcriptional regulator | VSVS12_RS15675 | Q7MGF9 | Negative | 184180 - 184896 | 26259.9 |
| duf3283 family protein | VSVS12_RS15680 | Not Available | Negative | 184982 - 185191 | 7984.65 |
| hypothetical protein | VSVS12_RS15685 | Not Available | Negative | 185341 - 185538 | 7496.99 |
| abc transporter atp-binding protein | VSVS12_RS15690 | P24136 | Positive | 185909 - 186757 | 31709.3 |
| atp-binding cassette domain-containing protein | VSVS12_RS15695 | P24137 | Positive | 186754 - 187686 | 34340.5 |
| transcriptional regulator | VSVS12_RS15700 | Not Available | Positive | 187683 - 188156 | 18662.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



