Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yhev family putative zinc ribbon protein | VSVS12_RS02305 | P0ADX0 | Positive | 500808 - 501002 | 7517.89 |
| peptidylprolyl isomerase | VSVS12_RS02310 | Q9KNX6 | Positive | 501090 - 501668 | 20412.4 |
| isoaspartyl peptidase/l-asparaginase family protein | VSVS12_RS02315 | P37595 | Positive | 501801 - 502742 | 32883.2 |
| adenylosuccinate synthase | VSVS12_RS02320 | P40607 | Positive | 502880 - 504196 | 47606.1 |
| flagellar protein motx | VSVS12_RS02325 | P40608 | Positive | 504532 - 505167 | 24271.1 |
| amidohydrolase | VSVS12_RS02330 | A0LMI3 | Negative | 505262 - 506671 | 51428.3 |
| ribonuclease r | VSVS12_RS02335 | P40611 | Positive | 507012 - 509480 | 93291.7 |
| 23s rrna (guanosine(2251)-2'-o)-methyltransferase rlmb | VSVS12_RS02340 | Q87L11 | Positive | 509505 - 510242 | 26519.3 |
| 30s ribosomal protein s10 | VSVS12_RS02345 | A5F550 | Positive | 510837 - 511148 | 11708.3 |
| 50s ribosomal protein l3 | VSVS12_RS02350 | A5F549 | Positive | 511163 - 511792 | 22344.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



