Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| shikimate kinase arok | VSVS12_RS02205 | A7MSY3 | Positive | 479680 - 480198 | 19234.8 |
| 3-dehydroquinate synthase | VSVS12_RS02210 | B7VLJ6 | Positive | 480229 - 481332 | 39805.1 |
| spor domain-containing protein | VSVS12_RS02215 | Not Available | Positive | 481428 - 482900 | 54901.7 |
| dam family site-specific dna-(adenine-n6)-methyltransferase | VSVS12_RS02220 | A5F520 | Positive | 483025 - 483879 | 32376.3 |
| ribulose-phosphate 3-epimerase | VSVS12_RS02225 | P0AG09 | Positive | 483983 - 484654 | 24305.5 |
| phosphoglycolate phosphatase | VSVS12_RS02230 | Q7MH14 | Positive | 484680 - 485360 | 24299.0 |
| tryptophan--trna ligase | VSVS12_RS02235 | Q8DCT6 | Positive | 485477 - 486493 | 37632.2 |
| aminodeoxychorismate/anthranilate synthase component ii | VSVS12_RS02240 | P06195 | Positive | 486662 - 487240 | 21218.4 |
| aspartate aminotransferase family protein | VSVS12_RS02245 | Q7MH19 | Positive | 487734 - 488948 | 43596.3 |
| arginine n-succinyltransferase | VSVS12_RS02250 | Q8FH00 | Positive | 489009 - 490028 | 37587.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



